Index

_

__call__() (Track method) (VectorInterpolator method) __class_getitem__() (SurfaceMapping class method) __getattr__() (in module isofit.debug.ray_bypass) (Ini method), [1] (Remote method) __getitem__() (Create method) (Ini method), [1] (RadiativeTransferEngine method) __iter__() (Ini method), [1] __repr__() (Create method) (Ini method), [1] (Remote method) (Worker method) __version__ (in module isofit) _AERFRAC_1_type (StateVectorConfig attribute) _AERFRAC_2_type (StateVectorConfig attribute) _AERFRAC_3_type (StateVectorConfig attribute) _aerosol_model_file_type (RadiativeTransferEngineConfig attribute) _aerosol_template_file_type (RadiativeTransferEngineConfig attribute) _AIRT_DELTA_K_type (StateVectorConfig attribute) _algebraic_inverse_file_header (OutputConfig attribute) _algebraic_inverse_file_type (OutputConfig attribute) _alt_type (RadiativeTransferEngineConfig attribute) _AOT550_type (StateVectorConfig attribute) _apparent_reflectance_file_header (OutputConfig attribute) _apparent_reflectance_file_type (OutputConfig attribute) _atmospheric_coefficients_file_header (OutputConfig attribute) _atmospheric_coefficients_file_type (OutputConfig attribute) _background_reflectance_file_type (InputConfig attribute) _base_surface_class_file_type (SurfaceConfig attribute) _bounds_type (StateVectorElementConfig attribute) _burnin_type (McmcConfig attribute) _cache_size_type (RadiativeTransferConfig attribute) _channelized_radiometric_uncertainty_file_type (InstrumentUnknowns attribute) _check_config_validity() (BaseConfigSection method), [1] (ForwardModelConfig method) (ImplementationConfig method) (InputConfig method) (InstrumentConfig method) (InstrumentUnknowns method) (InversionConfig method) (LeastSquaresConfig method) (McmcConfig method) (OutputConfig method) (RadiativeTransferConfig method) (RadiativeTransferEngineConfig method) (RadiativeTransferUnknownsConfig method) (StateVectorConfig method) (StateVectorElementConfig method) (SurfaceConfig method) _column_covariances() (in module isofit.utils.instrument_model) _cressie_map_confidence_type (InversionConfig attribute) _day_type (RadiativeTransferEngineConfig attribute) _debug_mode_type (ImplementationConfig attribute) _dirs (Ini attribute), [1] _disable_makeSim (RadiativeTransferEngine attribute) (SimulatedModtranRT attribute), [1] _dn_uncertainty_file_type (InstrumentUnknowns attribute) _earth_sun_distance_file_type (RadiativeTransferEngineConfig attribute) _EHB_ (_sp attribute) _EHL_ (_sp attribute) _EHR_ (_sp attribute) _elev_type (RadiativeTransferEngineConfig attribute) _emissivity_for_surface_T_init_type (SurfaceConfig attribute) _emulator_aux_file_type (RadiativeTransferEngineConfig attribute) _emulator_file_type (RadiativeTransferEngineConfig attribute) _engine_base_dir_type (RadiativeTransferEngineConfig attribute) _engine_lut_file_type (RadiativeTransferEngineConfig attribute) _engine_name_type (RadiativeTransferEngineConfig attribute) _environment_type (RadiativeTransferEngineConfig attribute) _estimated_emission_file_header (OutputConfig attribute) _estimated_emission_file_type (OutputConfig attribute) _estimated_reflectance_file_header (OutputConfig attribute) _estimated_reflectance_file_type (OutputConfig attribute) _estimated_state_file_header (OutputConfig attribute) _estimated_state_file_type (OutputConfig attribute) _fast_resample_type (InstrumentConfig attribute) _flat_field() (in module isofit.utils.instrument_model) _forward_model_type (Config attribute), [1] _ftol_type (LeastSquaresConfig attribute) _get_expected_type_for_option_key() (BaseConfigSection method), [1] _get_hidden_attributes() (BaseConfigSection method), [1] _get_nontype_attributes() (BaseConfigSection method), [1] _get_type_attributes() (BaseConfigSection method), [1] _glint_model_type (RadiativeTransferEngineConfig attribute) _glt_file_type (InputConfig attribute) _GROW_FWHM_type (StateVectorConfig attribute) _gtol_type (LeastSquaresConfig attribute) _H2O_ABSCO_type (RadiativeTransferUnknownsConfig attribute) _H2OSTR_type (StateVectorConfig attribute) _high_frequency_vert() (in module isofit.utils.instrument_model) _hor2d_chunk() (in module isofit.utils.skyview) _implementation_type (Config attribute), [1] _init_type (StateVectorElementConfig attribute) _input_type (Config attribute), [1] _instrument_type (ForwardModelConfig attribute) _integration_grid_type (InversionConfig attribute) _integrations_type (InstrumentConfig attribute) _interpolate() (VectorInterpolator method) _interpolator_style_type (RadiativeTransferConfig attribute) _inversion_grid_as_preseed_type (InversionConfig attribute) _inversion_type (ImplementationConfig attribute) _io_buffer_size_type (ImplementationConfig attribute) _ip_head_type (ImplementationConfig attribute) _irradiance_file_type (RadiativeTransferEngineConfig attribute) _isofit_version_type (ImplementationConfig attribute) _iterations_type (McmcConfig attribute) _keys (Ini attribute), [1] (RadiativeTransfer attribute) _least_squares_params_type (InversionConfig attribute)

_loc_file_type (InputConfig attribute) _lookup() (VectorInterpolator method) _low_frequency_horiz() (in module isofit.utils.instrument_model) _lut_complevel_type (RadiativeTransferEngineConfig attribute) _lut_compression_type (RadiativeTransferEngineConfig attribute) _lut_grid_type (RadiativeTransferConfig attribute) _lut_names_type (RadiativeTransferEngineConfig attribute) _lut_path_type (RadiativeTransferEngineConfig attribute) _max_hash_table_size_type (ImplementationConfig attribute) _max_nfev_type (LeastSquaresConfig attribute) _mcmc_samples_file_type (OutputConfig attribute) _mcmc_type (InversionConfig attribute) _measured_radiance_file_type (InputConfig attribute) _method_type (LeastSquaresConfig attribute) _mode_type (ImplementationConfig attribute) _model_discrepancy_file_type (ForwardModelConfig attribute) _modeled_radiance_file_header (OutputConfig attribute) _modeled_radiance_file_type (OutputConfig attribute) _month_type (RadiativeTransferEngineConfig attribute) _multi_surface_flag_type (SurfaceConfig attribute) _multilinear_grid() (VectorInterpolator method) _multipart_transmittance_type (RadiativeTransferEngineConfig attribute) _n_cores_type (ImplementationConfig attribute) _name_type (RadiativeTransferEngineConfig attribute) _nedt_noise_file_type (InstrumentConfig attribute) _NLOab_ (_sp attribute) _NLOcd_ (_sp attribute) _NLOY_ (_sp attribute) _NO_EXECUTABLE_MARKER (in module isofit.test.test_cli_machinery) _obs_file_type (InputConfig attribute) (RadiativeTransferEngineConfig attribute) _output_type (Config attribute), [1] _overwrite_interpolator_type (RadiativeTransferConfig attribute) _parallel_layer_read_type (RadiativeTransferEngineConfig attribute) _parametric_noise_file_type (InstrumentConfig attribute) _path_bak (Ini attribute), [1] _path_radiance_file_header (OutputConfig attribute) _path_radiance_file_type (OutputConfig attribute) _plot_surface_components_type (OutputConfig attribute) _posterior_uncertainty_file_header (OutputConfig attribute) _posterior_uncertainty_file_type (OutputConfig attribute) _predict_parallel_chunks_type (RadiativeTransferEngineConfig attribute) _prior_mean_type (StateVectorElementConfig attribute) _prior_sigma_type (StateVectorElementConfig attribute) _priors_in_initial_guess_type (InversionConfig attribute) _proposal_scaling_type (McmcConfig attribute) _pushbroom_noise_file_type (InstrumentConfig attribute) _radiative_transfer_engines_type (RadiativeTransferConfig attribute) _radiative_transfer_type (ForwardModelConfig attribute) _radiometry_correction_file_header (OutputConfig attribute) _radiometry_correction_file_type (InputConfig attribute) (OutputConfig attribute) _ray_ignore_reinit_error_type (ImplementationConfig attribute) _ray_include_dashboard_type (ImplementationConfig attribute) _ray_temp_dir_type (ImplementationConfig attribute) _redis_password_type (ImplementationConfig attribute) _reference_reflectance_file_type (InputConfig attribute) _reflectance_file_type (InputConfig attribute) _regularizer_type (McmcConfig attribute) _restart_every_type (McmcConfig attribute) _rt_mode_type (RadiativeTransferEngineConfig attribute) _rte_configure_and_exit_type (RadiativeTransferEngineConfig attribute) _run_chunk() (in module isofit.utils.atm_interpolation) (in module isofit.utils.empirical_line) _scale_type (StateVectorElementConfig attribute) _select_on_init_type (SurfaceConfig attribute) _selection_metric_type (SurfaceConfig attribute) _set_rt_config_options() (RadiativeTransferConfig method) _set_statevector_config_options() (StateVectorConfig method) _sim_path_type (RadiativeTransferEngineConfig attribute) _simulated_measurement_file_header (OutputConfig attribute) _simulated_measurement_file_type (OutputConfig attribute) _sky_glint_prior_sigma_type (SurfaceConfig attribute) _skyview_factor_file_type (InputConfig attribute) _SNR_type (InstrumentConfig attribute) _solaz_type (RadiativeTransferEngineConfig attribute) _solzen_type (RadiativeTransferEngineConfig attribute) _sp (class in isofit.core.sunposition) _spectral_calibration_file_header (OutputConfig attribute) _spectral_calibration_file_type (OutputConfig attribute) _statevector_names_type (RadiativeTransferEngineConfig attribute) _statevector_type (InstrumentConfig attribute) (RadiativeTransferConfig attribute) _stray_srf_uncertainty_type (InstrumentUnknowns attribute) _sun_glint_prior_sigma_type (SurfaceConfig attribute) _surface_category_type (SurfaceConfig attribute) _surface_class_file_type (SurfaceConfig attribute) _surface_elevation_km_type (StateVectorConfig attribute) _surface_file_type (SurfaceConfig attribute) _surface_T_prior_sigma_degK_type (SurfaceConfig attribute) _surface_type (ForwardModelConfig attribute) _Surfaces_type (SurfaceConfig attribute) _task_inflation_factor_type (ImplementationConfig attribute) _template_file_type (RadiativeTransferEngineConfig attribute) _tr_solver_type (LeastSquaresConfig attribute) _track() (ResourceTracker method) _treat_as_emissive_type (RadiativeTransferEngineConfig attribute) _uncorrelated_radiometric_uncertainty_type (InstrumentUnknowns attribute) _unknowns_type (InstrumentConfig attribute) (RadiativeTransferConfig attribute) _verbose_type (McmcConfig attribute) _viewaz_type (RadiativeTransferEngineConfig attribute) _viewzen_type (RadiativeTransferEngineConfig attribute) _wavelength_calibration_uncertainty_type (InstrumentUnknowns attribute) _wavelength_file_type (InstrumentConfig attribute) (RadiativeTransferEngineConfig attribute) (SurfaceConfig attribute) _wavelength_range_type (RadiativeTransferEngineConfig attribute) _windows_type (InversionConfig attribute) _WL_SHIFT_type (StateVectorConfig attribute) _WL_SPACE_type (StateVectorConfig attribute) _xtol_type (LeastSquaresConfig attribute)

A

abberation_correction() (_sp static method) actors (util.ActorPool attribute) add_wavelength_elements() (in module isofit.utils.wavelength_cal) adjust_spacing() (in module isofit.utils.skyview) AERFRAC_1 (StateVectorConfig attribute) AERFRAC_2 (StateVectorConfig attribute) AERFRAC_3 (StateVectorConfig attribute) aerosol_0_range (LUTConfig attribute) aerosol_0_spacing (LUTConfig attribute) aerosol_0_spacing_min (LUTConfig attribute) aerosol_1_range (LUTConfig attribute) aerosol_1_spacing (LUTConfig attribute) aerosol_1_spacing_min (LUTConfig attribute) aerosol_2_range (LUTConfig attribute) aerosol_2_spacing (LUTConfig attribute) aerosol_2_spacing_min (LUTConfig attribute) aerosol_climatology (Pathnames attribute) aerosol_model_file (RadiativeTransferEngineConfig attribute) aerosol_template_file (RadiativeTransferEngineConfig attribute) aerosol_tpl_path (Pathnames attribute) AIRT_DELTA_K (StateVectorConfig attribute) algebraic_inverse_file (OutputConfig attribute) algebraic_line() (in module isofit.utils.algebraic_line) algebraic_rfl_file (Worker attribute) alldim (Create attribute) (Keys attribute) alt (RadiativeTransferEngineConfig attribute) analytical_iv_idx (GlintModelSurface attribute), [1] (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1]

analytical_line() (in module isofit.utils) (in module isofit.utils.analytical_line) analytical_model() (GlintModelSurface method), [1] (LUTSurface method), [1] (MultiComponentSurface method), [1] aod_to_vis() (in module isofit.core.units) AOT550 (StateVectorConfig attribute) aot_550_range (LUTConfig attribute) aot_550_spacing (LUTConfig attribute) aot_550_spacing_min (LUTConfig attribute) apparent_reflectance_file (OutputConfig attribute) apply_oe() (in module isofit.utils.apply_oe) ApplyOEExample (class in isofit.data.build_examples) arcdist() (in module isofit.core.sunposition) args (Remote attribute) aspect() (in module isofit.utils.skyview) aspect_to_ipw_radians() (in module isofit.utils.skyview) assign_bounds() (KernelFlowsRT method), [1] atm_bands (Worker attribute), [1] atm_coeff_path (Pathnames attribute) atm_interpolation() (in module isofit.utils.atm_interpolation) atmospheric_coefficients_file (OutputConfig attribute) attrs (Create attribute) aux_quantities (SimulatedModtranRT attribute), [1] average_columns() (in module isofit.utils.wavelength_cal) az (Sunposition attribute)

B

background_reflectance_file (InputConfig attribute) band_mean() (in module isofit.utils.reducers) band_names (SpectrumFile attribute) base_surface_class_file (SurfaceConfig attribute) BaseConfigSection (class in isofit.configs) (class in isofit.configs.base_config) BaseSurface (class in isofit.surface) Bash (in module isofit.data.build_examples) bbl (IO attribute) beer_lambert_model() (in module isofit.inversion.inverse_simple) bg_rfl (Geometry attribute) bounds (BaseSurface attribute) (ForwardModel attribute) (Instrument attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (RadiativeTransfer attribute) (StateVectorElementConfig attribute) (Surface attribute) bounds_check() (in module isofit.radiative_transfer.engines.kernel_flows)

build() (ApplyOEExample method) (Example method) (in module isofit.data.build_examples) (IsofitExample method) build_interpolators() (RadiativeTransferEngine method) build_main_config() (in module isofit.utils.template_construction) build_output() (IO method) build_presolve_config() (in module isofit.utils.template_construction) build_sixs_config() (in module isofit.radiative_transfer.engines.sRTMnet) burnin (McmcConfig attribute) (MCMCInversion attribute), [1] bval (BaseSurface attribute) (Instrument attribute) (RadiativeTransfer attribute) (Surface attribute) bvec (BaseSurface attribute) (ForwardModel attribute) (Instrument attribute) (RadiativeTransfer attribute) (Surface attribute)

C

Cache (in module isofit.core.common) cache_size (RadiativeTransferConfig attribute) cached (RadiativeTransferEngine attribute) calc_conditional_prior() (ClassicInversion method) (Inversion method) calc_lamb() (BaseSurface method) (ForwardModel method) (LUTSurface method), [1] (MultiComponentSurface method), [1] (Surface method) calc_Ls() (BaseSurface method) (ForwardModel method) (LUTSurface method), [1] (MultiComponentSurface method), [1] (Surface method) (ThermalSurface method), [1] calc_meas() (ForwardModel method) calc_modtran_max_water() (in module isofit.utils.template_construction) calc_posterior() (ClassicInversion method) (Inversion method) calc_prior() (ClassicInversion method) (Inversion method) calc_rdn() (RadiativeTransfer method) calc_rfl() (BaseSurface method) (ForwardModel method) (GlintModelSurface method), [1] (LUTSurface method), [1] (MultiComponentSurface method), [1] (Surface method) calc_RT_quantities() (RadiativeTransfer method) calc_Seps() (ClassicInversion method) (Inversion method) calc_slope() (in module isofit.utils.skyview) calculate_resample_matrix() (in module isofit.core.common) calendar_time() (_sp static method) calibration() (ForwardModel method) (Instrument method) calibration_fixed (Instrument attribute) callback (ResourceTracker attribute) changeBase() (Ini method), [1] changedBoth() (in module isofit.test.test_env) changedDirs() (in module isofit.test.test_env) changedKeys() (in module isofit.test.test_env) changeKey() (Ini method), [1] changePath() (Ini method), [1] changeSection() (Ini method), [1] channelized_radiometric_uncertainty_file (InstrumentUnknowns attribute) channelized_uncertainty_working_path (Pathnames attribute) check (in module isofit.data.shared) check_config_validity() (BaseConfigSection method), [1] check_ini() (in module isofit.test.test_env) check_inter_section_validity() (Config method), [1] check_modtran_water_upperbound() (ModtranRT method), [1] check_surface_model() (in module isofit.utils.template_construction) checkNumThreads() (in module isofit) CHUNKSIZE (in module isofit.utils.apply_oe) citation (Sunposition property) class_idx_pairs (Worker attribute) class_priority() (in module isofit.utils.reducers) ClassicInversion (class in isofit.inversion) cleanup() (in module isofit.radiative_transfer.luts) clear() (InputData method) CLI (class in isofit.__main__) cli() (in module isofit.__main__) (in module isofit.core.isofit) (in module isofit.data) (in module isofit.data.build_examples) (in module isofit.data.download) (in module isofit.data.validate) (in module isofit.utils.add_HRRR_profiles_to_modtran_config) (in module isofit.utils.algebraic_line) (in module isofit.utils.analytical_line) (in module isofit.utils.apply_oe) (in module isofit.utils.convert_6s_to_srtmnet) (in module isofit.utils.empirical_line) (in module isofit.utils.ewt_from_reflectance) (in module isofit.utils.interpolate_spectra) (in module isofit.utils.multicomponent_classification) (in module isofit.utils.reconstruct) (in module isofit.utils.skyview) (in module isofit.utils.solar_position) (in module isofit.utils.surface_model)

cli_get_wavelength_adjustment() (in module isofit.utils.wavelength_cal) cli_wavelength_cal() (in module isofit.utils.wavelength_cal) cm_to_mm() (in module isofit.core.units) cm_to_nm() (in module isofit.core.units) CMD (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.imagecube) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.sixs) (in module isofit.data.cli.srtmnet) co2_mode (SixSRT attribute), [1] co2_range (LUTConfig attribute) co2_spacing (LUTConfig attribute) co2_spacing_min (LUTConfig attribute) cols (Isofit attribute) combos() (in module isofit.core.common) compare() (in module isofit.core.common) (in module isofit.data.cli.srtmnet) completed_spectra (Worker attribute), [1], [2] complevel (Create attribute) Component (class in isofit.utils.multicomponent_classification) component (Worker attribute) component() (MultiComponentSurface method), [1] components (Component attribute) (MultiComponentSurface attribute), [1] compression (Create attribute) conditional_gaussian() (in module isofit.core.common) Config (class in isofit.configs) (class in isofit.configs.configs) config (ClassicInversion attribute) (HRRR_to_MODTRAN_profiles attribute) (Inversion attribute) (IO attribute) (Isofit attribute) (Worker attribute), [1], [2] config_directory (Pathnames attribute) confPriority() (in module isofit.radiative_transfer.radiative_transfer) construct_full_state() (in module isofit.core.multistate) consts (Create attribute) (Keys attribute) copy_file_subset() (in module isofit.utils.template_construction) CORES (in module isofit.test.test_cli) cores (ResourceTracker attribute) cos_i (Geometry attribute) coszen (RadiativeTransfer property) (RadiativeTransferEngine attribute) counts (ClassicInversion attribute) (Inversion attribute) couple() (in module isofit.radiative_transfer.luts) coupling_terms (RadiativeTransferEngine attribute) Create (class in isofit.radiative_transfer.luts) create_new_config() (in module isofit.configs.configs) create_profiles() (HRRR_to_MODTRAN_profiles method) create_shadow_mask() (in module isofit.utils.skyview) createScript() (in module isofit.data.build_examples) cressie_map_confidence (InversionConfig attribute) current_input_data (IO attribute) cwd() (in module isofit.test.test_cli)

D

data (in module isofit.data) (LUTSurface attribute), [1] data_directory (Pathnames attribute) day (RadiativeTransferEngineConfig attribute) dayofyear (Worker attribute) debug_mode (ImplementationConfig attribute) dec (Sunposition attribute) decorator() (in module isofit.test.test_ray_bypass) decorator_nocpu() (in module isofit.test.test_ray_bypass) default() (SerialEncoder method), [1] define_surface_types() (in module isofit.utils.template_construction) detectInstalled() (in module isofit.data.cli.srtmnet) dev() (in module isofit.data) dlamb_dsurface() (LUTSurface method), [1] (MultiComponentSurface method), [1] (ThermalSurface method), [1] dLs_dsurface() (BaseSurface method) (LUTSurface method), [1] (MultiComponentSurface method), [1] (Surface method) (ThermalSurface method), [1] dmeas_dinstrument() (Instrument method) dmeas_dinstrumentb() (Instrument method) DN_additive_uncertainty() (Instrument static method) dn_uncertainty_embedding (Instrument attribute) dn_uncertainty_file (InstrumentUnknowns attribute) download (in module isofit.data.shared) download() (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.imagecube) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.sixs) (in module isofit.data.cli.srtmnet)

download_all() (in module isofit.data.cli) download_cli() (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.imagecube) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.sixs) (in module isofit.data.cli.srtmnet) download_file() (in module isofit.data.download) download_HRRR() (in module isofit.utils.add_HRRR_profiles_to_modtran_config) download_mingw() (in module isofit.data.cli.sixs) download_neon() (in module isofit.data.cli.examples) drdn_dglint() (GlintModelSurface method), [1] drdn_dLs() (LUTSurface method), [1] (MultiComponentSurface method), [1] drdn_drfl() (LUTSurface method), [1] (MultiComponentSurface method), [1] drdn_dRT() (RadiativeTransfer method) drdn_dRTb() (RadiativeTransfer method) drdn_dsurface() (GlintModelSurface method), [1] (LUTSurface method), [1] (MultiComponentSurface method), [1] (ThermalSurface method), [1] drfl_dsurface() (BaseSurface method) (GlintModelSurface method), [1] (LUTSurface method), [1] (MultiComponentSurface method), [1] (Surface method) drfl_dsurfaceb() (BaseSurface method) (Surface method) dt (Sunposition attribute)

E

E_to_L() (in module isofit.core.units) earth_sun_distance (Geometry attribute) earth_sun_distance_file (RadiativeTransferEngineConfig attribute) earth_sun_distance_path (Pathnames attribute) earth_sun_distance_reference (Geometry attribute) ecliptic_obliquity() (_sp static method) elev (RadiativeTransferEngineConfig attribute) (Sunposition attribute) elevation_spacing (LUTConfig attribute) elevation_spacing_min (LUTConfig attribute) emissive (BaseSurface attribute) (Surface attribute) (ThermalSurface attribute), [1] emissive_radiance() (in module isofit.core.common) emissivity_for_surface_T_init (SurfaceConfig attribute) (ThermalSurface attribute), [1] empirical_line() (in module isofit.utils) (in module isofit.utils.empirical_line) emulator_aux_file (RadiativeTransferEngineConfig attribute) emulator_file (RadiativeTransferEngineConfig attribute) emulator_internal_idx (KernelFlowsRT attribute), [1] emulator_names (KernelFlowsRT attribute), [1] emulator_wl (KernelFlowsRT attribute), [1] engine_base_dir (RadiativeTransferEngine attribute) (RadiativeTransferEngineConfig attribute) (SixSRT attribute), [1] engine_config (RadiativeTransferEngine attribute) engine_lut_file (RadiativeTransferEngineConfig attribute) engine_name (IO attribute) (RadiativeTransferEngineConfig attribute)

Engines (in module isofit.radiative_transfer.engines) env (in module isofit.data) (in module isofit.data.cli) env_validate() (in module isofit.data.cli) envi_header() (in module isofit.core.common) environment (RadiativeTransferEngineConfig attribute) eps (in module isofit.core.common) (in module isofit.radiative_transfer.engines.modtran) (in module isofit.radiative_transfer.engines.six_s) EPS (in module isofit.utils.apply_oe) error_code (in module isofit.inversion.inverse) esd (IO attribute) (Worker attribute), [1] esd_factor (Geometry attribute) estimated_emission_file (OutputConfig attribute) estimated_reflectance_file (OutputConfig attribute) estimated_state_file (OutputConfig attribute) Example (class in isofit.data.build_examples) Examples (in module isofit.data.build_examples) exe (SixSRT attribute), [1] expand_all_paths() (in module isofit.core.common) expand_path() (in module isofit.core.common) ext550_to_vis() (in module isofit.radiative_transfer.radiative_transfer) extract_chunk() (in module isofit.utils.extractions) extractGrid() (in module isofit.radiative_transfer.luts) extractions() (in module isofit.utils) (in module isofit.utils.extractions) extractPoints() (in module isofit.radiative_transfer.luts)

F

f (KernelFlowsRT attribute), [1] fast_resample (Instrument attribute) (InstrumentConfig attribute) file (Create attribute) (FileResources attribute) FileResources (class in isofit.debug.resource_tracker) files() (in module isofit.test.test_cli) filter_image() (in module isofit.utils.multicomponent_classification) finalize() (Create method) find_header() (in module isofit.core.common) findSlice() (in module isofit.radiative_transfer.luts) fit_params() (BaseSurface method) (GlintModelSurface method), [1] (LUTSurface method), [1] (MultiComponentSurface method), [1] (Surface method) (ThermalSurface method), [1] flag (SpectrumFile attribute) flush() (Create method) flush_buffers() (IO method) (SpectrumFile method) flush_rate (IO attribute) fm (ClassicInversion attribute) (Inversion attribute) (Worker attribute), [1], [2] fname (SpectrumFile attribute)

forward_model (Config attribute), [1] forward_uncertainty() (ClassicInversion method) (Inversion method) ForwardModel (class in isofit.core.forward) ForwardModelConfig (class in isofit.configs.sections.forward_model_config) frames (SpectrumFile attribute) fresnel_rf() (GlintModelSurface static method), [1] fromTemplate() (in module isofit.data) (Ini method), [1] ft_to_m() (in module isofit.core.units) ftol (LeastSquaresConfig attribute) full_config (ForwardModel attribute) full_glint (MultiComponentSurface attribute), [1] full_idx_RT (Worker attribute) full_idx_surf_rfl (Worker attribute) full_idx_surface (Worker attribute) full_lut_directory (Pathnames attribute) full_statevector (Worker attribute) full_statevector() (ClassicInversion method) (Inversion method) fwhm (BaseSurface attribute) (RadiativeTransferEngine attribute) (SixSRT attribute), [1] (SpectrumFile attribute) (Surface attribute) (Worker attribute)

G

generate_noise() (in module isofit.utils) (in module isofit.utils.generate_noise) geocentric_position() (_sp static method) geom (InputData attribute) Geometry (class in isofit.core.geometry) geometry_input_names (RadiativeTransferEngine attribute) get() (in module isofit.debug.ray_bypass) (RadiativeTransferEngine method) (Remote method) get_absorption() (in module isofit.core.common) get_all_bounds() (StateVectorConfig method) get_all_element_names() (BaseConfigSection method), [1] get_all_elements() (BaseConfigSection method), [1] get_all_inits() (StateVectorConfig method) get_all_output_file_names() (OutputConfig method) get_all_prior_means() (StateVectorConfig method) get_all_prior_sigmas() (StateVectorConfig method) get_all_scales() (StateVectorConfig method) get_command() (CLI method) get_components_at_index() (IO method) get_config_as_dict() (BaseConfigSection method), [1] get_config_differences() (in module isofit.configs.configs) get_config_errors() (Config method), [1] get_config_options_as_dict() (BaseConfigSection method), [1] get_element_names() (BaseConfigSection method), [1] get_elements() (BaseConfigSection method), [1] get_esd_factor() (Geometry method) get_exe() (in module isofit.radiative_transfer.engines.six_s) get_frame() (SpectrumFile method)

get_grid() (LUTConfig method) get_grid_with_data() (LUTConfig method) get_HRRR_data() (in module isofit.utils.add_HRRR_profiles_to_modtran_config) get_L_atm() (RadiativeTransfer method) get_L_coupled() (RadiativeTransfer method) get_L_down_transmitted() (RadiativeTransfer method) get_lut_subset() (in module isofit.utils.template_construction) get_metadata_from_loc() (in module isofit.utils.template_construction) get_metadata_from_obs() (in module isofit.utils.template_construction) get_output_files() (OutputConfig method) get_shared_rtm_quantities() (RadiativeTransfer method) get_single_element_by_name() (BaseConfigSection method), [1] get_wavelength_adjustment() (in module isofit.utils.wavelength_cal) get_wavelengths() (in module isofit.utils.template_construction) getAttr() (Create method) getVersion() (in module isofit.data.cli.srtmnet) getWorkingDir() (in module isofit.data.ini) glint_ind (GlintModelSurface attribute), [1] glint_model (RadiativeTransferEngine attribute) (RadiativeTransferEngineConfig attribute) GlintModelSurface (class in isofit.surface) (class in isofit.surface.surface_glint_model) glt_file (InputConfig attribute) gradient_d8() (in module isofit.utils.skyview) greenwich_sidereal_time() (_sp static method) grid (Create attribute) grid_as_starting_points (ClassicInversion attribute) (Inversion attribute) GROW_FWHM (StateVectorConfig attribute) gtol (LeastSquaresConfig attribute)

H

h (Sunposition attribute) H2O_ABSCO (RadiativeTransferUnknownsConfig attribute) h2o_config_path (Pathnames attribute) h2o_min (LUTConfig attribute) h2o_range (LUTConfig attribute) h2o_spacing (LUTConfig attribute) h2o_spacing_min (LUTConfig attribute) h2o_subs_path (Pathnames attribute) h2o_template_path (Pathnames attribute) H2OSTR (StateVectorConfig attribute) h5_to_dict() (KernelFlowsRT method), [1] hash_size (Worker attribute), [1] hash_table (Worker attribute), [1] hashtable (ClassicInversion attribute) (Inversion attribute)

heliocentric_latitude() (_sp static method) heliocentric_longitude() (_sp static method) heliocentric_position() (_sp static method) heliocentric_radius() (_sp static method) heuristic_atmosphere() (in module isofit.inversion.inverse_simple) hold (Create attribute) hor1d() (in module isofit.utils.skyview) hor2d() (in module isofit.utils.skyview) horizon() (in module isofit.utils.skyview) horizon_worker() (in module isofit.utils.skyview) horval() (in module isofit.utils.skyview) HRRR_data_library_path (HRRR_to_MODTRAN_profiles attribute) HRRR_to_MODTRAN_profiles (class in isofit.utils.add_HRRR_profiles_to_modtran_config)

I

idx_instrument (ForwardModel attribute) idx_lamb (BaseSurface attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (Surface attribute) idx_lut (LUTSurface attribute), [1] idx_ref (Component attribute) (MultiComponentSurface attribute), [1] idx_RT (ForwardModel attribute) idx_surf_nonrfl (ForwardModel attribute) idx_surf_rfl (ForwardModel attribute) idx_surface (BaseSurface attribute) (ForwardModel attribute) (GlintModelSurface attribute), [1] (MultiComponentSurface attribute), [1] (Surface attribute) (ThermalSurface attribute), [1] implementation (Config attribute), [1] ImplementationConfig (class in isofit.configs.sections.implementation_config) in_img (Worker attribute) index_spectra_by_surface() (in module isofit.core.multistate) index_spectra_by_surface_view() (in module isofit.core.multistate) indices (RadiativeTransferEngine attribute) infile (Worker attribute) info (ResourceTracker attribute) Ini (class in isofit.data) (class in isofit.data.ini) init (BaseSurface attribute) (ForwardModel attribute) (Instrument attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (RadiativeTransfer attribute) (StateVectorElementConfig attribute) (Surface attribute) init() (in module isofit.debug.ray_bypass) init_horizon() (in module isofit.utils.skyview) initialize() (Create method) initialize_output() (in module isofit.core.fileio) initialize_output_files() (IO static method) initializer (Worker attribute) inplace (Worker attribute) input (Config attribute), [1] input_data_directory (Pathnames attribute) input_loc_file (Pathnames attribute) input_obs_file (Pathnames attribute) input_radiance_file (Pathnames attribute) input_transfs (KernelFlowsRT attribute), [1] InputConfig (class in isofit.configs.sections.input_config) InputData (class in isofit.core.fileio) install() (in module isofit.data.cli.isoplots) installTabCompletion() (in module isofit.data) Instrument (class in isofit.core.instrument) instrument (ForwardModel attribute) (ForwardModelConfig attribute) instrument_b_inds (ForwardModel attribute) instrument_model() (in module isofit.utils) (in module isofit.utils.instrument_model) InstrumentConfig (class in isofit.configs.sections.instrument_config) InstrumentUnknowns (class in isofit.configs.sections.instrument_config) integration_grid (ClassicInversion attribute) (Inversion attribute) (InversionConfig attribute) integrations (Instrument attribute) (InstrumentConfig attribute) interpolate() (RadiativeTransferEngine method) interpolate_chunk() (Worker method) interpolate_spectra() (in module isofit.utils) (in module isofit.utils.interpolate_spectra) interpolate_values() (Worker method) interpolator_style (RadiativeTransferConfig attribute) (RadiativeTransferEngine attribute) interval (ResourceTracker attribute) Inversion (class in isofit.inversion.inverse) inversion (ImplementationConfig attribute) Inversion() (in module isofit.inversion) inversion_grid_as_preseed (InversionConfig attribute) INVERSION_WINDOWS (in module isofit.utils.apply_oe) InversionConfig (class in isofit.configs.sections.inversion_config) inversions (ClassicInversion attribute) (Inversion attribute) invert() (ClassicInversion method) (Inversion method) (MCMCInversion method), [1] invert_algebraic() (in module isofit.inversion.inverse_simple) invert_analytical() (in module isofit.inversion.inverse_simple) invert_liquid_water() (in module isofit.inversion.inverse_simple) invert_simple() (in module isofit.inversion.inverse_simple) invoke() (CLI method) IO (class in isofit.core.fileio) io (Worker attribute) io_buffer_size (ImplementationConfig attribute) ip_head (ImplementationConfig attribute) irradiance_file (Pathnames attribute) (RadiativeTransferEngineConfig attribute) IS_INSTALLED_VIA_PYTHONPATH (in module isofit.test.test_cli_machinery) is_running() (ResourceTracker method) isofit module Isofit (class in isofit.core.isofit) isofit.__main__ module isofit.configs module isofit.configs.base_config module isofit.configs.configs module isofit.configs.sections module isofit.configs.sections.forward_model_config module isofit.configs.sections.implementation_config module isofit.configs.sections.input_config module isofit.configs.sections.instrument_config module isofit.configs.sections.inversion_config module isofit.configs.sections.output_config module isofit.configs.sections.radiative_transfer_config module isofit.configs.sections.statevector_config module isofit.configs.sections.surface_config module isofit.core module isofit.core.common module isofit.core.fileio module isofit.core.forward module isofit.core.geometry module isofit.core.instrument module isofit.core.isofit module isofit.core.multistate module isofit.core.sunposition module isofit.core.units module isofit.data module isofit.data.build_examples module isofit.data.cli module

isofit.data.cli.data module isofit.data.cli.examples module isofit.data.cli.imagecube module isofit.data.cli.isoplots module isofit.data.cli.sixs module isofit.data.cli.srtmnet module isofit.data.download module isofit.data.ini module isofit.data.shared module isofit.data.validate module isofit.debug module isofit.debug.ray_bypass module isofit.debug.resource_tracker module isofit.inversion module isofit.inversion.inverse module isofit.inversion.inverse_mcmc module isofit.inversion.inverse_simple module isofit.radiative_transfer module isofit.radiative_transfer.engines module isofit.radiative_transfer.engines.kernel_flows module isofit.radiative_transfer.engines.modtran module isofit.radiative_transfer.engines.six_s module isofit.radiative_transfer.engines.sRTMnet module isofit.radiative_transfer.luts module isofit.radiative_transfer.radiative_transfer module isofit.radiative_transfer.radiative_transfer_engine module isofit.surface module isofit.surface.surface module isofit.surface.surface_glint_model module isofit.surface.surface_lut module isofit.surface.surface_multicomp module isofit.surface.surface_thermal module isofit.test module isofit.test.conftest module isofit.test.test_cli module isofit.test.test_cli_machinery module isofit.test.test_common module isofit.test.test_env module isofit.test.test_examples module isofit.test.test_fileio module isofit.test.test_forward module isofit.test.test_geometry module isofit.test.test_instrument module isofit.test.test_inverse module isofit.test.test_lut module isofit.test.test_ray_bypass module isofit.test.test_sunposition module isofit.utils module isofit.utils.add_HRRR_profiles_to_modtran_config module isofit.utils.algebraic_line module isofit.utils.analytical_line module isofit.utils.apply_oe module isofit.utils.atm_interpolation module isofit.utils.convert_6s_to_srtmnet module isofit.utils.empirical_line module isofit.utils.ewt_from_reflectance module isofit.utils.extractions module isofit.utils.generate_noise module isofit.utils.instrument_model module isofit.utils.interpolate_spectra module isofit.utils.multicomponent_classification module isofit.utils.reconstruct module isofit.utils.reducers module isofit.utils.remap module isofit.utils.segment module isofit.utils.skyview module isofit.utils.solar_position module isofit.utils.surface_model module isofit.utils.template_construction module isofit.utils.wavelength_cal module ISOFIT_ABSPATH (in module isofit.test.test_cli_machinery) isofit_full_config_path (Pathnames attribute) isofit_version (ImplementationConfig attribute) IsofitExample (class in isofit.data.build_examples) isoplots (in module isofit.test.test_cli_machinery) isUpToDate() (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.srtmnet) isUpToDateGithub() (in module isofit.data.download) items() (Ini method), [1] iterations (McmcConfig attribute) (MCMCInversion attribute), [1] itp (LUTSurface attribute), [1] iv (Worker attribute), [1]

J

jacobian() (ClassicInversion method) (Inversion method) json_load_ascii() (in module isofit.core.common) julian_century() (_sp static method)

julian_day() (_sp static method) (in module isofit.core.sunposition) julian_ephemeris_day() (_sp static method) julian_millennium() (_sp static method)

K

K() (ForwardModel method) Kb() (ForwardModel method) KernelFlowsRT (class in isofit.radiative_transfer.engines) (class in isofit.radiative_transfer.engines.kernel_flows) KEYMAPPING (in module isofit.radiative_transfer.engines.kernel_flows)

Keys (class in isofit.radiative_transfer.luts) keys() (Ini method), [1] km_to_m() (in module isofit.core.units) kwargs (in module isofit.data) (Remote attribute)

L

L_to_E() (in module isofit.core.units) lasttime (ClassicInversion attribute) (Inversion attribute) lat (Sunposition attribute) latitude (Geometry attribute) laziest (CLI attribute) lazy (CLI attribute) lbl (Worker attribute) lbl_file (Worker attribute), [1] lbl_working_path (Pathnames attribute) leaky_re_lu() (tfLikeModel method) least_squares_params (ClassicInversion attribute) (Inversion attribute) (InversionConfig attribute) LeastSquaresConfig (class in isofit.configs.sections.inversion_config) list_commands() (CLI method) load() (in module isofit.radiative_transfer.luts) (Ini method), [1] load_arrays() (tfLikeModel method) load_chn() (ModtranRT method), [1] load_climatology() (in module isofit.utils.template_construction) load_esd() (IO static method) (SixSRT method), [1] load_horizon() (in module isofit.utils.skyview) load_input() (in module isofit.utils.skyview) load_spectrum() (in module isofit.core.common) load_surface_mat() (in module isofit.utils.multicomponent_classification) load_tp6() (ModtranRT static method), [1] load_wavelen() (in module isofit.core.common) loc (Worker attribute), [1] loc_file (InputConfig attribute) (Worker attribute) loc_subs_path (Pathnames attribute)

log_density() (MCMCInversion method), [1] logfile (Isofit attribute) Logger (in module isofit) (in module isofit.core.fileio) (in module isofit.core.forward) (in module isofit.data.ini) (in module isofit.debug) (in module isofit.debug.ray_bypass) (in module isofit.radiative_transfer.engines.kernel_flows) (in module isofit.radiative_transfer.engines.modtran) (in module isofit.radiative_transfer.engines.six_s) (in module isofit.radiative_transfer.engines.sRTMnet) (in module isofit.radiative_transfer.luts) (in module isofit.radiative_transfer.radiative_transfer) (in module isofit.radiative_transfer.radiative_transfer_engine) loglevel (Isofit attribute) lon (Sunposition attribute) longitude (Geometry attribute) loss_function() (ClassicInversion method) (Inversion method) lut_complevel (RadiativeTransferEngineConfig attribute) lut_compression (RadiativeTransferEngineConfig attribute) lut_grid (LUTSurface attribute), [1] (RadiativeTransfer attribute) (RadiativeTransferConfig attribute) lut_h2o_directory (Pathnames attribute) lut_names (LUTSurface attribute), [1] (RadiativeTransferEngineConfig attribute) lut_path (RadiativeTransferEngineConfig attribute) lut_quantities (SimulatedModtranRT attribute), [1] LUTConfig (class in isofit.utils.template_construction) LUTSurface (class in isofit.surface) (class in isofit.surface.surface_lut)

M

m_to_ft() (in module isofit.core.units) m_to_km() (in module isofit.core.units) main() (CLI method) (in module isofit.utils.ewt_from_reflectance) make() (in module isofit.data.cli.sixs) make_directories() (Pathnames method) make_surface_config() (in module isofit.utils.template_construction) makeApplyOE() (ApplyOEExample method) makeConfigs() (Example method) makeScripts() (IsofitExample method) makeSim() (KernelFlowsRT method), [1] (ModtranRT method), [1] (RadiativeTransferEngine method) (SimulatedModtranRT method), [1] (SixSRT method), [1] map_unordered() (util.ActorPool method) match_statevector() (in module isofit.core.multistate) max_buffer_time (ModtranRT attribute), [1] (RadiativeTransferEngine attribute) max_frames_size (in module isofit.core.fileio) max_hash_table_size (ImplementationConfig attribute) max_nfev (LeastSquaresConfig attribute) max_table_size (ClassicInversion attribute) (Inversion attribute) mcmc (InversionConfig attribute) mcmc_samples_file (OutputConfig attribute) McmcConfig (class in isofit.configs.sections.inversion_config) MCMCInversion (class in isofit.inversion) (class in isofit.inversion.inverse_mcmc) mean (LUTSurface attribute), [1] meas (InputData attribute) meas_fwhm (IO attribute) meas_wl (IO attribute) measured_radiance_file (InputConfig attribute) message (Track attribute) method (LeastSquaresConfig attribute) micron_to_nm() (in module isofit.core.units) MINGW (in module isofit.data.cli.sixs) mm_to_cm() (in module isofit.core.units) mode (ClassicInversion attribute) (ImplementationConfig attribute) (Inversion attribute) model_dict (BaseSurface attribute) (Component attribute) (Surface attribute) model_discrepancy_file (ForwardModelConfig attribute) model_discrepancy_working_path (Pathnames attribute) modeled_radiance_file (OutputConfig attribute) modtran_aot_lowerbound_polynomials() (ModtranRT static method), [1] modtran_config_filenames (HRRR_to_MODTRAN_profiles attribute) modtran_driver() (ModtranRT method), [1] modtran_emulation (SixSRT attribute), [1] modtran_template_path (Pathnames attribute) modtran_water_upperbound_polynomials() (ModtranRT static method), [1] ModtranRT (class in isofit.radiative_transfer.engines) (class in isofit.radiative_transfer.engines.modtran) module isofit isofit.__main__ isofit.configs isofit.configs.base_config isofit.configs.configs isofit.configs.sections isofit.configs.sections.forward_model_config isofit.configs.sections.implementation_config isofit.configs.sections.input_config isofit.configs.sections.instrument_config isofit.configs.sections.inversion_config isofit.configs.sections.output_config isofit.configs.sections.radiative_transfer_config isofit.configs.sections.statevector_config isofit.configs.sections.surface_config isofit.core isofit.core.common isofit.core.fileio isofit.core.forward isofit.core.geometry isofit.core.instrument isofit.core.isofit isofit.core.multistate isofit.core.sunposition isofit.core.units isofit.data isofit.data.build_examples isofit.data.cli isofit.data.cli.data isofit.data.cli.examples isofit.data.cli.imagecube isofit.data.cli.isoplots isofit.data.cli.sixs isofit.data.cli.srtmnet isofit.data.download isofit.data.ini isofit.data.shared isofit.data.validate isofit.debug isofit.debug.ray_bypass isofit.debug.resource_tracker isofit.inversion isofit.inversion.inverse isofit.inversion.inverse_mcmc isofit.inversion.inverse_simple isofit.radiative_transfer isofit.radiative_transfer.engines isofit.radiative_transfer.engines.kernel_flows isofit.radiative_transfer.engines.modtran isofit.radiative_transfer.engines.six_s isofit.radiative_transfer.engines.sRTMnet isofit.radiative_transfer.luts isofit.radiative_transfer.radiative_transfer isofit.radiative_transfer.radiative_transfer_engine isofit.surface isofit.surface.surface isofit.surface.surface_glint_model isofit.surface.surface_lut isofit.surface.surface_multicomp isofit.surface.surface_thermal isofit.test isofit.test.conftest isofit.test.test_cli isofit.test.test_cli_machinery isofit.test.test_common isofit.test.test_env isofit.test.test_examples isofit.test.test_fileio isofit.test.test_forward isofit.test.test_geometry isofit.test.test_instrument isofit.test.test_inverse isofit.test.test_lut isofit.test.test_ray_bypass isofit.test.test_sunposition isofit.utils isofit.utils.add_HRRR_profiles_to_modtran_config isofit.utils.algebraic_line isofit.utils.analytical_line isofit.utils.apply_oe isofit.utils.atm_interpolation isofit.utils.convert_6s_to_srtmnet isofit.utils.empirical_line isofit.utils.ewt_from_reflectance isofit.utils.extractions isofit.utils.generate_noise isofit.utils.instrument_model isofit.utils.interpolate_spectra isofit.utils.multicomponent_classification isofit.utils.reconstruct isofit.utils.reducers isofit.utils.remap isofit.utils.segment isofit.utils.skyview isofit.utils.solar_position isofit.utils.surface_model isofit.utils.template_construction isofit.utils.wavelength_cal

Modules (in module isofit.data.cli) month (RadiativeTransferEngineConfig attribute) multi_surface_flag (SurfaceConfig attribute) multicomponent_classification() (in module isofit.utils) (in module isofit.utils.multicomponent_classification) MultiComponentSurface (class in isofit.surface) (class in isofit.surface.surface_multicomp) multipart_transmittance (RadiativeTransferEngine attribute) (RadiativeTransferEngineConfig attribute)

N

n (VectorInterpolator attribute) n_bands (SpectrumFile attribute) n_chan (Instrument attribute) (IO attribute) (RadiativeTransferEngine attribute) n_cols (IO attribute) (SpectrumFile attribute) n_comp (Component attribute) (MultiComponentSurface attribute), [1] n_cores (ImplementationConfig attribute) n_lines (Worker attribute) n_lut (LUTSurface attribute), [1] n_meas (ForwardModel attribute) n_non_rfl_bands (Worker attribute) n_point (RadiativeTransferEngine attribute) n_rfl_bands (Worker attribute) n_rows (IO attribute) (SpectrumFile attribute) n_samples (Worker attribute) n_state (GlintModelSurface attribute), [1] (Instrument attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (ThermalSurface attribute), [1]

n_sv (IO attribute) n_wl (Component attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] name (Example attribute) (RadiativeTransferEngineConfig attribute) (Worker attribute) nbvec (ForwardModel attribute) nedt_noise_file (InstrumentConfig attribute) NEON_URL (in module isofit.data.cli.examples) next_diag_val() (in module isofit.utils.surface_model) nm_to_cm() (in module isofit.core.units) nm_to_micron() (in module isofit.core.units) nm_to_wavenumber() (in module isofit.core.units) no_min_lut_spacing (LUTConfig attribute) nodata_value (Worker attribute) non_rfl_outpath (Worker attribute) non_rfl_unc_outpath (Worker attribute) norm_lat_lon() (_sp static method) normalize (MultiComponentSurface attribute), [1] normalize() (in module isofit.test.test_env) nstate (ForwardModel attribute) num_iter (Worker attribute), [1] nutation_obliquity() (_sp static method)

O

obj (Remote attribute) obs (Worker attribute), [1] obs_file (InputConfig attribute) (RadiativeTransferEngineConfig attribute) (Worker attribute) obs_subs_path (Pathnames attribute) observed_sunpos() (in module isofit.core.sunposition) observer_altitude_km (Geometry attribute) observer_azimuth (Geometry attribute) observer_zenith (Geometry attribute) OEScript (in module isofit.data.build_examples) onedim (Create attribute) (Keys attribute) open_map_with_retries() (SpectrumFile method)

optimizedInterp() (in module isofit.radiative_transfer.luts) out (Worker attribute) out_file (Worker attribute) out_of_bounds() (ForwardModel method) output (Config attribute), [1] (in module isofit.data.shared) output_directory (Pathnames attribute) output_modtran_config_filenames (HRRR_to_MODTRAN_profiles attribute) output_transfs (KernelFlowsRT attribute), [1] OutputConfig (class in isofit.configs.sections.output_config) outside_ret_windows (ClassicInversion attribute) (Inversion attribute) overwrite (in module isofit.data.shared) overwrite_interpolator (RadiativeTransferConfig attribute) (RadiativeTransferEngine attribute)

P

p (Sunposition attribute) pack_arrays() (RadiativeTransfer method) parallel_layer_read (RadiativeTransferEngineConfig attribute) parametric_noise_file (InstrumentConfig attribute) parse_file() (SixSRT static method), [1] parseLine() (ModtranRT static method), [1] parseTokens() (ModtranRT static method), [1] patch_makefile() (in module isofit.data.cli.sixs) path (in module isofit.data.shared) path() (Ini method), [1] path_radiance_file (OutputConfig attribute) Pathnames (class in isofit.utils.template_construction) percent (Track attribute) pickClosest() (Component method) plot_surface_components (OutputConfig attribute) point_to_filename() (RadiativeTransferEngine method) pointIndices() (Create method) points_bound_max (KernelFlowsRT attribute), [1] points_bound_min (KernelFlowsRT attribute), [1] pos() (_sp static method) posterior_uncertainty_file (OutputConfig attribute) postSim() (RadiativeTransferEngine method) (SimulatedModtranRT method), [1] (SixSRT method), [1] potential_isofit_path (in module isofit.test.test_cli_machinery) precheck() (in module isofit.data.cli.sixs) predict() (in module isofit.utils.convert_6s_to_srtmnet) (KernelFlowsRT method), [1] (tfLikeModel method)

predict_M() (in module isofit.radiative_transfer.engines.kernel_flows) predict_parallel_chunks (RadiativeTransferEngineConfig attribute) predict_single_MVM() (KernelFlowsRT method), [1] prepare_output() (in module isofit.data.download) preSim() (KernelFlowsRT method), [1] (ModtranRT method), [1] (RadiativeTransferEngine method) (SimulatedModtranRT method), [1] (SixSRT method), [1] preview_paths() (in module isofit.data.download) print (Track attribute) prior_mean (Instrument attribute) (RadiativeTransfer attribute) (StateVectorElementConfig attribute) prior_sigma (Instrument attribute) (RadiativeTransfer attribute) (StateVectorElementConfig attribute) priors_in_initial_guess (InversionConfig attribute) proposal_scaling (McmcConfig attribute) (MCMCInversion attribute), [1] pullFromRepo() (in module isofit.data.download) pushbroom_noise_file (InstrumentConfig attribute) put() (in module isofit.debug.ray_bypass) pygrib (in module isofit.utils.add_HRRR_profiles_to_modtran_config) pytest_collection_modifyitems() (in module isofit.test.conftest) pytestmark (in module isofit.test.test_cli) Pyth (in module isofit.data.build_examples)

Q

queuePoint() (Create method)

R

ra (Sunposition attribute) rad (Sunposition attribute) radiance_correction (IO attribute) radiative_transfer (ForwardModelConfig attribute) radiative_transfer_engines (RadiativeTransferConfig attribute) RadiativeTransfer (class in isofit.radiative_transfer.radiative_transfer) RadiativeTransferConfig (class in isofit.configs.sections.radiative_transfer_config) RadiativeTransferEngine (class in isofit.radiative_transfer.radiative_transfer_engine) RadiativeTransferEngineConfig (class in isofit.configs.sections.radiative_transfer_config) RadiativeTransferUnknownsConfig (class in isofit.configs.sections.radiative_transfer_config) radiometry_correction_file (InputConfig attribute) (OutputConfig attribute) ray_ignore_reinit_error (ImplementationConfig attribute) ray_include_dashboard (ImplementationConfig attribute) ray_predict() (in module isofit.radiative_transfer.engines.sRTMnet) ray_start() (in module isofit.core.common) ray_temp_dir (ImplementationConfig attribute) (Pathnames attribute) rdn (Worker attribute), [1] rdn_factors_path (Pathnames attribute) rdn_file (Worker attribute) rdn_subs_path (Pathnames attribute) rdn_to_transm() (in module isofit.core.units) read_spectrum() (SpectrumFile method) reads (IO attribute) readSim() (KernelFlowsRT method), [1] (ModtranRT method), [1] (RadiativeTransferEngine method) (SimulatedModtranRT method), [1] (SixSRT method), [1] reassemble_cube() (in module isofit.utils.template_construction) rebuild_cmd() (SixSRT method), [1] reconstruct_subs() (in module isofit.utils) (in module isofit.utils.reconstruct) recursive_reencode() (in module isofit.core.common) recursive_replace() (in module isofit.core.common) redis_password (ImplementationConfig attribute) reduce_points() (in module isofit.radiative_transfer.engines.kernel_flows) reference_reflectance (InputData attribute) reference_reflectance_file (InputConfig attribute) reflectance_file (InputConfig attribute) refwl (MultiComponentSurface attribute), [1] regularizer (McmcConfig attribute) (MCMCInversion attribute), [1] relative_azimuth_spacing (LUTConfig attribute)

relative_azimuth_spacing_min (LUTConfig attribute) release_metadata() (in module isofit.data.download) remap() (in module isofit.utils) (in module isofit.utils.remap) Remote (class in isofit.debug.ray_bypass) remote() (in module isofit.debug.ray_bypass) (Remote method) reporthook() (in module isofit.utils.add_HRRR_profiles_to_modtran_config) required_results_exist() (ModtranRT method), [1] requires (Example attribute) resample_reflectance() (BaseSurface method) (Surface method) resample_spectrum() (in module isofit.core.common) reset() (Ini method), [1] resolve() (CLI method) ResourceTracker (class in isofit.debug.resource_tracker) restart_every (McmcConfig attribute) (MCMCInversion attribute), [1] retrieve_winidx() (in module isofit.utils.analytical_line) reverse (Track attribute) rfl_bounds (Worker attribute) rfl_outpath (Worker attribute) rfl_subs_path (Pathnames attribute) rfl_to_rrs() (in module isofit.core.units) rfl_working_path (Pathnames attribute) round (ResourceTracker attribute) rows (Isofit attribute) rrs_to_rfl() (in module isofit.core.units) RT_b_inds (ForwardModel attribute) rt_engines (RadiativeTransfer attribute) rt_mode (KernelFlowsRT attribute), [1] (RadiativeTransferEngine attribute) (RadiativeTransferEngineConfig attribute) rt_state (Worker attribute) RT_state_file (Worker attribute) RTE (in module isofit.radiative_transfer.radiative_transfer) rte_configure_and_exit (RadiativeTransferEngineConfig attribute) RTM_CLEANUP_LIST (in module isofit.utils.apply_oe) run() (Isofit method) run_chunks() (Worker method) run_lines() (in module isofit.utils.ewt_from_reflectance) (Worker method), [1] run_set_of_spectra() (Worker method) runOnAll() (in module isofit.data.cli) runSimulations() (RadiativeTransferEngine method)

S

Sa() (BaseSurface method) (ForwardModel method) (GlintModelSurface method), [1] (Instrument method) (LUTSurface method), [1] (MultiComponentSurface method), [1] (RadiativeTransfer method) (Surface method) (ThermalSurface method), [1] Sa_cached (Instrument attribute) (RadiativeTransfer attribute) Sa_normalized (Instrument attribute) (RadiativeTransfer attribute) sample() (Instrument method) save (in module isofit.data) save() (Ini method), [1] save_horizon() (in module isofit.utils.skyview) saveDataset() (in module isofit.radiative_transfer.luts) Sb() (BaseSurface method) (ForwardModel method) (Instrument method) (LUTSurface method), [1] (RadiativeTransfer method) (Surface method) scale (BaseSurface attribute) (ForwardModel attribute) (Instrument attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (RadiativeTransfer attribute) (StateVectorElementConfig attribute) (Surface attribute) segment() (in module isofit.utils) (in module isofit.utils.segment) segment_chunk() (in module isofit.utils.segment) sel() (in module isofit.radiative_transfer.luts) select_on_init (MultiComponentSurface attribute), [1] (SurfaceConfig attribute) selection_metric (MultiComponentSurface attribute), [1] (SurfaceConfig attribute) sensor_name_to_dt() (in module isofit.utils.template_construction) Seps() (ForwardModel method) SerialEncoder (class in isofit.utils.template_construction), [1] set_config_options() (BaseConfigSection method), [1] setAttr() (Create method) setPath() (Example method) shutdown() (in module isofit.debug.ray_bypass) sigma (LUTSurface attribute), [1] sim_path (RadiativeTransferEngine attribute) (RadiativeTransferEngineConfig attribute) simulate_measurement() (Instrument method) simulated_measurement_file (OutputConfig attribute) SimulatedModtranRT (class in isofit.radiative_transfer.engines) (class in isofit.radiative_transfer.engines.sRTMnet) simulation_mode (IO attribute) single_point_data (VectorInterpolator attribute) sixs_path (Pathnames attribute) SIXS_TEMPLATE (in module isofit.radiative_transfer.engines.six_s) SixSRT (class in isofit.radiative_transfer.engines) (class in isofit.radiative_transfer.engines.six_s) size (in module isofit.data.cli.imagecube) sizes (Create attribute) skew() (in module isofit.utils.skyview) skew_transpose() (in module isofit.utils.skyview) sky_glint_ind (GlintModelSurface attribute), [1] sky_glint_prior_sigma (SurfaceConfig attribute) sky_glint_sigma (GlintModelSurface attribute), [1] skyview() (in module isofit.utils.skyview) skyview_factor (Geometry attribute) skyview_factor_file (InputConfig attribute) SNR (InstrumentConfig attribute) solar_azimuth (Geometry attribute) solar_irr (RadiativeTransfer attribute) (RadiativeTransferEngine attribute) (Worker attribute) solar_position() (in module isofit.utils.solar_position) solar_zenith (Geometry attribute) solarIrradiance() (Worker method) solaz (RadiativeTransferEngineConfig attribute) solzen (RadiativeTransferEngineConfig attribute) some_func() (Worker method)

spectral_calibration_file (OutputConfig attribute) spectral_response_function() (in module isofit.core.common) SpectrumFile (class in isofit.core.fileio) stable_mvnpdf() (MCMCInversion method), [1] stage_files() (Pathnames method) start (Track attribute) start() (ResourceTracker method) state_indep_S_hat (ClassicInversion attribute) (Inversion attribute) state_subs_path (Pathnames attribute) state_working_path (Pathnames attribute) statevec (ForwardModel attribute) statevec_names (BaseSurface attribute) (Instrument attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (RadiativeTransfer attribute) (Surface attribute) statevector (InstrumentConfig attribute) (RadiativeTransferConfig attribute) statevector_names (RadiativeTransferEngineConfig attribute) StateVectorConfig (class in isofit.configs.sections.statevector_config) StateVectorElementConfig (class in isofit.configs.sections.statevector_config) step (Track attribute) stop() (ResourceTracker method) stray_srf_uncertainty (InstrumentUnknowns attribute) stream() (in module isofit.debug.resource_tracker) streamSimulation() (in module isofit.radiative_transfer.radiative_transfer_engine) sub() (in module isofit.radiative_transfer.luts) subs_state (Worker attribute) subs_state_file (Worker attribute), [1] summarize (ResourceTracker attribute) summarize() (BaseSurface method) (ForwardModel method) (GlintModelSurface method), [1] (Instrument method) (LUTSurface method), [1] (MultiComponentSurface method), [1] (RadiativeTransfer method) (RadiativeTransferEngine method) (Surface method) (ThermalSurface method), [1] sun_glint_ind (GlintModelSurface attribute), [1] sun_glint_prior_sigma (SurfaceConfig attribute) sun_glint_sigma (GlintModelSurface attribute), [1] sun_longitude() (_sp static method) sun_ra_decl() (_sp static method) sun_topo_azimuth_zenith() (_sp static method) sun_topo_ra_decl_hour() (_sp static method) sunpos() (in module isofit.core.sunposition) Sunposition (class in isofit.core.sunposition) SUPPORTED_SENSORS (in module isofit.utils.apply_oe) surf_temp_ind (ThermalSurface attribute), [1] Surface (class in isofit.surface.surface) surface (ForwardModel attribute) (ForwardModelConfig attribute) Surface() (in module isofit.surface) surface() (in module isofit.test.test_cli) surface_b_inds (ForwardModel attribute) surface_categories (Component attribute) surface_category (SurfaceConfig attribute) surface_class_file (SurfaceConfig attribute) surface_class_str (Worker attribute) surface_classes (SurfaceMapping attribute) surface_elevation_km (Geometry attribute) (StateVectorConfig attribute) surface_file (SurfaceConfig attribute) surface_model() (in module isofit.utils) (in module isofit.utils.surface_model) surface_path (Pathnames attribute) surface_T_prior_sigma_degK (SurfaceConfig attribute) (ThermalSurface attribute), [1] surface_template_path (Pathnames attribute) surface_working_paths (Pathnames attribute) SurfaceConfig (class in isofit.configs.sections.surface_config) SurfaceMapping (class in isofit.core.multistate) Surfaces (SurfaceConfig attribute) svd_inv() (in module isofit.core.common) svd_inv_sqrt() (in module isofit.core.common) svf_subs_path (Pathnames attribute) Sy() (Instrument method)

T

t (Sunposition attribute) tag (in module isofit.data.shared) task_inflation_factor (ImplementationConfig attribute) temp (Sunposition attribute) template_file (RadiativeTransferEngineConfig attribute) test__sp() (in module isofit.test.test_sunposition) test_apply_oe() (in module isofit.test.test_cli) test_av3_calibration() (in module isofit.test.test_examples) test_changeBase() (in module isofit.test.test_env) test_changeKey() (in module isofit.test.test_env) test_changePath() (in module isofit.test.test_env) test_check_surface() (in module isofit.test.test_examples) test_classes() (in module isofit.test.test_ray_bypass) test_combined() (in module isofit.test.test_lut) test_combos() (in module isofit.test.test_common) test_custom_ini() (in module isofit.test.test_env) test_decorators() (in module isofit.test.test_ray_bypass) test_eps() (in module isofit.test.test_common) test_error_code() (in module isofit.test.test_forward) (in module isofit.test.test_inverse) test_expand_path() (in module isofit.test.test_common) test_Geometry() (in module isofit.test.test_geometry) test_get_absorption() (in module isofit.test.test_common) test_interpolators() (in module isofit.test.test_common) test_load_spectrum() (in module isofit.test.test_common) test_load_wavelen() (in module isofit.test.test_common) test_max_frames_size() (in module isofit.test.test_fileio) test_modtran_one() (in module isofit.test.test_examples) test_multisurface_inversions() (in module isofit.test.test_examples) test_pasadena_modtran() (in module isofit.test.test_examples) test_pasadena_topoflux() (in module isofit.test.test_examples) test_raise_path_errors() (in module isofit.test.test_env)

test_recursive_replace() (in module isofit.test.test_common) test_santa_monica() (in module isofit.test.test_examples) test_spectral_response_function() (in module isofit.test.test_common) test_subcommand_registration() (in module isofit.test.test_cli_machinery) test_svd_inv() (in module isofit.test.test_common) test_svd_inv_sqrt() (in module isofit.test.test_common) test_typemap() (in module isofit.test.test_fileio) test_version() (in module isofit.test.test_cli_machinery) test_wl_tol() (in module isofit.test.test_instrument) tfLikeModel (class in isofit.radiative_transfer.engines.sRTMnet) ThermalSurface (class in isofit.surface) (class in isofit.surface.surface_thermal) thread (ResourceTracker attribute) to_sensor_zenith_spacing (LUTConfig attribute) to_sensor_zenith_spacing_min (LUTConfig attribute) to_sun_zenith_spacing (LUTConfig attribute) to_sun_zenith_spacing_min (LUTConfig attribute) topo_pos() (_sp static method) topocentric_sunpos() (in module isofit.core.sunposition) total (Track attribute) total_samples (Worker attribute) total_time (IO attribute) toTemplate() (in module isofit.data) (Ini method), [1] tr_solver (LeastSquaresConfig attribute) Track (class in isofit.core.common) transm_to_rdn() (in module isofit.core.units) transpose_skew() (in module isofit.utils.skyview) treat_as_emissive (RadiativeTransferEngine attribute) (RadiativeTransferEngineConfig attribute) tropopause_altitude_km (in module isofit.radiative_transfer.engines.modtran) two_albedo_method() (RadiativeTransferEngine static method) typemap (in module isofit.core.fileio)

U

unc_outpath (Worker attribute) uncert_subs_path (Pathnames attribute) uncert_working_path (Pathnames attribute) UNCORRELATED_RADIOMETRIC_UNCERTAINTY (in module isofit.utils.apply_oe) uncorrelated_radiometric_uncertainty (InstrumentUnknowns attribute) unknowns (Instrument attribute) (InstrumentConfig attribute) (RadiativeTransferConfig attribute) unpack() (ForwardModel method) untar() (in module isofit.data.download) unzip() (in module isofit.data.download) update() (in module isofit.data.build_examples) (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.imagecube) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.sixs) (in module isofit.data.cli.srtmnet)

update_config_for_surface() (in module isofit.core.multistate) update_h_for_local_topo() (in module isofit.utils.skyview) updateTemplate() (in module isofit.data.build_examples) upsample() (ForwardModel method) URL (in module isofit.data.cli.imagecube) (in module isofit.data.cli.srtmnet) util (class in isofit.debug.ray_bypass) util.ActorPool (class in isofit.debug.ray_bypass) uW_to_W() (in module isofit.core.units) uWcm2_to_Wm2() (in module isofit.core.units)

V

validate (in module isofit.data.shared) validate() (Example method) (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.imagecube) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.sixs) (in module isofit.data.cli.srtmnet) (Ini static method), [1] validate_all() (in module isofit.data.cli) validate_cli() (in module isofit.data.cli.data) (in module isofit.data.cli.examples) (in module isofit.data.cli.imagecube) (in module isofit.data.cli.isoplots) (in module isofit.data.cli.sixs) (in module isofit.data.cli.srtmnet)

validate_flags (Example attribute) VectorInterpolator (class in isofit.core.common) verbose (McmcConfig attribute) (MCMCInversion attribute), [1] verify() (Geometry method) viewaz (RadiativeTransferEngineConfig attribute) viewzen (RadiativeTransferEngineConfig attribute) vis_to_aod() (in module isofit.core.units)

W

W_to_uW() (in module isofit.core.units) wait() (in module isofit.debug.ray_bypass) wavelength_cal() (in module isofit.utils.wavelength_cal) wavelength_calibration_uncertainty (InstrumentUnknowns attribute) wavelength_file (InstrumentConfig attribute) (RadiativeTransferEngineConfig attribute) (SurfaceConfig attribute) wavelength_path (Pathnames attribute) wavelength_range (RadiativeTransferEngineConfig attribute) wavenumber_to_nm() (in module isofit.core.units) windows (ClassicInversion attribute) (Inversion attribute) (InversionConfig attribute) winidx (ClassicInversion attribute) (Inversion attribute) (Worker attribute) wl (BaseSurface attribute) (Component attribute) (Create attribute) (LUTSurface attribute), [1] (MultiComponentSurface attribute), [1] (RadiativeTransfer attribute) (RadiativeTransferEngine attribute) (SixSRT attribute), [1] (SpectrumFile attribute) (Surface attribute) (Worker attribute), [1]

wl2flt() (ModtranRT method), [1] WL_SHIFT (StateVectorConfig attribute) WL_SPACE (StateVectorConfig attribute) wl_tol (in module isofit.core.instrument) Wm2_to_uWcm2() (in module isofit.core.units) Worker (class in isofit.core.isofit) (class in isofit.test.test_ray_bypass) (class in isofit.utils.algebraic_line) (class in isofit.utils.analytical_line) (class in isofit.utils.interpolate_spectra) (class in isofit.utils.multicomponent_classification) worker_id (Worker attribute) workers (Isofit attribute) working_directory (Pathnames attribute) write (SpectrumFile attribute) write() (FileResources method) write_bil_chunk() (in module isofit.core.fileio) write_datasets() (IO method) write_modtran_template() (in module isofit.utils.template_construction) write_spectrum() (IO method) (SpectrumFile method) write_wavelength_file() (in module isofit.utils.template_construction) writePoint() (Create method) writes (IO attribute)

X

x_fixed (ClassicInversion attribute) (Inversion attribute) xa() (BaseSurface method) (ForwardModel method) (GlintModelSurface method), [1] (Instrument method) (LUTSurface method), [1] (MultiComponentSurface method), [1] (RadiativeTransfer method) (Surface method) (ThermalSurface method), [1]

xtol (LeastSquaresConfig attribute)

Y

year_for_HRRR_profiles_in_modtran (HRRR_to_MODTRAN_profiles attribute)

Z

zen (Sunposition attribute)