isofit.utils.atm_interpolation
==============================

.. py:module:: isofit.utils.atm_interpolation


Functions
---------

.. autoapisummary::

   isofit.utils.atm_interpolation._run_chunk
   isofit.utils.atm_interpolation.atm_interpolation


Module Contents
---------------

.. py:function:: _run_chunk(start_line: int, stop_line: int, reference_state_file: str, reference_locations_file: str, input_locations_file: str, segmentation_file: str, output_atm_file: str, atm_band_names: list, nneighbors: list, nodata_value: float, loglevel: str, logfile: str) -> None

   :param start_line: line to start empirical line run at
   :param stop_line: line to stop empirical line run at
   :param reference_state_file: source file for retrieved superpixel state
   :param reference_locations_file: source file for file locations (lon, lat, elev), (interpolation built from this)
   :param input_locations_file: input location file (interpolate over this)
   :param segmentation_file: input file noting the per-pixel segmentation used
   :param output_atm_file: output file for interpolated and smoothed per pixel atmospheric state
   :param atm_band_names: names of atmospheric state parameters
   :param nneighbors: number of neighbors to use for interpolation
   :param nodata_value: nodata value of input and output
   :param loglevel: logging level
   :param logfile: logging file

   :returns: None


.. py:function:: atm_interpolation(reference_state_file: str, reference_locations_file: str, input_locations_file: str, segmentation_file: str, output_atm_file: str, atm_band_names: list, nneighbors: list = None, nodata_value: float = -9999.0, loglevel: str = 'INFO', logfile: str = None, n_cores: int = -1, gaussian_smoothing_sigma: list = None) -> None

   Perform an empirical line interpolation and gaussian smoothing to atmospheric parameters.
   :param reference_state_file: source file for retrieved superpixel state
   :param reference_locations_file: source file for file locations (lon, lat, elev), (interpolation built from this)
   :param input_locations_file: input location file (interpolate over this)
   :param segmentation_file: input file noting the per-pixel segmentation used
   :param output_atm_file: output file for interpolated and smoothed per pixel atmospheric state
   :param atm_band_names: names of atmospheric state parameters
   :param nneighbors: number of neighbors to use for interpolation
   :param nodata_value: nodata value of input and output
   :param loglevel: logging level
   :param logfile: logging file
   :param n_cores: number of cores to run on
   :param gaussian_smoothing_sigma: sigma value to apply to gaussian smoothing of atmospheric parameters

   :returns: None