isofit.utils.algebraic_line
===========================

.. py:module:: isofit.utils.algebraic_line


Classes
-------

.. autoapisummary::

   isofit.utils.algebraic_line.Worker


Functions
---------

.. autoapisummary::

   isofit.utils.algebraic_line.algebraic_line
   isofit.utils.algebraic_line.cli


Module Contents
---------------

.. py:function:: algebraic_line(rdn_file: str, loc_file: str, obs_file: str, isofit_dir: str, isofit_config: str = None, segmentation_file: str = None, num_neighbors: list = None, atm_sigma: list = None, n_cores: int = -1, num_iter: int = 1, output_rfl_file: str = None, atm_file: str = None, logging_level: str = 'INFO', log_file: str = None) -> None

   Run pixel-wise algebraic inversions, using provided atmosphere file.
   If no atmosphere file is provided, it will be created via interpolation
   from the state solution.

   :param rdn_file: Path to the radiance file
   :param loc_file: Path to the location file
   :param obs_file: Path to the observation file
   :param isofit_dir: Path to the isofit directory
   :param isofit_config: Path to the isofit configuration file
   :param segmentation_file: Path to the segmentation file (optional)
   :param num_neighbors: Number of atmospheric neighbors to use for interpolation
   :param atm_sigma: Smoothing sigma for the atmospheric interpolation
   :param n_cores: Number of cores to use for parallel processing
   :param num_iter: Number of iterations for the inversion
   :param output_rfl_file: Path to the output reflectance file
   :param atm_file: Path to the atmosphere file
   :param logging_level: Logging level (default: INFO)
   :param log_file: Path to the log file (default: None)

   :returns: None


.. py:class:: Worker(config: isofit.configs.configs.Config, fm: isofit.core.forward.ForwardModel, RT_state_file: str, algebraic_rfl_file: str, rdn_file: str, loc_file: str, obs_file: str, subs_state_file: str, lbl_file: str, num_iter: int, logging_level: str, log_file: str)

   Bases: :py:obj:`object`


   .. py:attribute:: config


   .. py:attribute:: fm


   .. py:attribute:: iv


   .. py:attribute:: rfl_bounds


   .. py:attribute:: completed_spectra
      :value: 0



   .. py:attribute:: hash_table


   .. py:attribute:: hash_size
      :value: 500



   .. py:attribute:: RT_state_file


   .. py:attribute:: rdn_file


   .. py:attribute:: loc_file


   .. py:attribute:: obs_file


   .. py:attribute:: algebraic_rfl_file


   .. py:attribute:: subs_state_file


   .. py:attribute:: lbl_file


   .. py:attribute:: atm_bands
      :value: []



   .. py:attribute:: num_iter


   .. py:method:: run_lines(startstop: tuple) -> None

      Run the algebraic line algorithm for a set of lines.
      :param startstop: tuple of (start_line, stop_line) to process

      :returns: None



.. py:function:: cli(**kwargs)

   Execute the algebraic line algorithm